Descriptions for the datasets. Related to SourceData project

Descriptions for the datasets. Equivalent to SourceData project’s initiative to enrich articles throughout in-publication or pre-publications phase, the publishers’ function is usually to enrich articles in prepublication phase by employing text-mining systems. Within the future, the curation step might not wait until following publication, as could be the existing practice. A possibility would be to move the curation step `upstream’ i.e. capturing expertise at the time of peer overview and prior to publication. Such an initiative would demand improvement of quite top quality and sustainable text-mining systems, and possibly need a higher invement on the article authors in validating a number of the text-mined benefits.Curators’ roleIt is central to keep the human curatorsexperts in the loop in any newly proposed text-mining-based curationPage ofDatabase,, Post ID bawNCBI Resource Coordinators Database sources on the National Center for Biotechnology Information. Nucleic Acids Res, D. Baxevanis,A.Dand Bateman,A. The importance of biological databases in biological discovery. Curr. Protoc. Bioinformatics Wei,C.HKao,H.Yand Lu,Z. PubTator: a web-based text mining tool for assisting biocuration. Nucleic Acids Res, W. The Europe PMC Consortium Europe PMC: a full-text literature database for the life sciences and platform for TA-02 innovation. Nucleic Acids Res, D. Lemberger,T. Tools of discovery. Mol. Syst. Biol,. Hirschman,LBurns,G.AKrallinger,M. et al. Text mining for the biocuration workflow. Database (Oxford) bas.Lu,Zand Hirschman,L. Biocuration workflows and text mining: overview from the BioCreative Workshop Track II. Database (Oxford) bas.Van Auken,KJaffery,JChan,J. et al. Semi-automated curation of protein subcellular localization: a text mining-based strategy to Gene Ontology (GO) Cellular Component curation. BMC Bioinformatics. Van Auken,KFey,PBerardini,T.Z. et al. Text mining inside the biocuration workflow: applications for literature curation at WormBase, dictyBase PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/25883088?dopt=Abstract and TAIR. Database (Oxford) bas.Wei,C.HHarris,B.RLi,D. et al. Accelerating literature curation with text-mining tools: a case study of utilizing PubTator to curate genes in PubMed abstracts. Database (Oxford) bas.Tudor,C.OArighi,C.NWang,Q. et al. The eFIP technique for text mining of protein interaction networks of phosphorylated proteins. Database (Oxford) bas.Cejuela,J.MMcQuilton,PPonting,L. et al. tagtog: interactive and text-mining-assisted annotation of gene mentions in full-text articles. Database (Oxford) bau.Arighi,C.NRoberts,P.MAgarwal,S. et al. BioCreative III interactive process: an overview. BMC Bioinformatics S.Arighi,C.NCarterette,BCohen,K.B. et al. An overview from the BioCreative Workshop Track III: interactive text mining job. Database (Oxford) bas.Matis-Mitchell,SRoberts,PTudor, C.Oand Arighi,C.N. BioCreative IV interactive job. Proceedings of your Fourth BioCreative Challenge Evaluation Workshop,Bethesda, MD, pp Wang,Q.HAbdul,S.SAlmeida,L. et al. Overview with the interactive process in BioCreative V. Database (Oxford) baw.Liechti,RGeorge,NEl-Gebali,S. et al. SourceData – a semantic platform for curating and browsing figures. bioRxiv,. Singhal,AKasturi,RSivakumar,V. et al. Leveraging net intelligence for obtaining fascinating analysis datasets. Proceedings of the International Joint Conferences on Internet Intelligence (WI) and Intelligent Agent Technologies (IAT). IEEEWICACM. IEEE,, ppecosystem. Curators are crucial for defining text-mining needs, delivering annotation suggestions and stand.Descriptions for the datasets. Comparable to SourceData project’s initiative to enrich articles in the course of in-publication or pre-publications phase, the publishers’ function might be to enrich articles in prepublication phase by employing text-mining systems. Within the future, the curation step might not wait until right after publication, as would be the existing practice. A possibility is usually to move the curation step `upstream’ i.e. capturing knowledge at the time of peer critique and prior to publication. Such an initiative would demand improvement of extremely good quality and sustainable text-mining systems, and possibly require a purchase BI-9564 greater invement of the article authors in validating a number of the text-mined final results.Curators’ roleIt is central to maintain the human curatorsexperts within the loop in any newly proposed text-mining-based curationPage ofDatabase,, Report ID bawNCBI Resource Coordinators Database sources of the National Center for Biotechnology Information. Nucleic Acids Res, D. Baxevanis,A.Dand Bateman,A. The importance of biological databases in biological discovery. Curr. Protoc. Bioinformatics Wei,C.HKao,H.Yand Lu,Z. PubTator: a web-based text mining tool for assisting biocuration. Nucleic Acids Res, W. The Europe PMC Consortium Europe PMC: a full-text literature database for the life sciences and platform for innovation. Nucleic Acids Res, D. Lemberger,T. Tools of discovery. Mol. Syst. Biol,. Hirschman,LBurns,G.AKrallinger,M. et al. Text mining for the biocuration workflow. Database (Oxford) bas.Lu,Zand Hirschman,L. Biocuration workflows and text mining: overview of your BioCreative Workshop Track II. Database (Oxford) bas.Van Auken,KJaffery,JChan,J. et al. Semi-automated curation of protein subcellular localization: a text mining-based method to Gene Ontology (GO) Cellular Element curation. BMC Bioinformatics. Van Auken,KFey,PBerardini,T.Z. et al. Text mining within the biocuration workflow: applications for literature curation at WormBase, dictyBase PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/25883088?dopt=Abstract and TAIR. Database (Oxford) bas.Wei,C.HHarris,B.RLi,D. et al. Accelerating literature curation with text-mining tools: a case study of utilizing PubTator to curate genes in PubMed abstracts. Database (Oxford) bas.Tudor,C.OArighi,C.NWang,Q. et al. The eFIP technique for text mining of protein interaction networks of phosphorylated proteins. Database (Oxford) bas.Cejuela,J.MMcQuilton,PPonting,L. et al. tagtog: interactive and text-mining-assisted annotation of gene mentions in full-text articles. Database (Oxford) bau.Arighi,C.NRoberts,P.MAgarwal,S. et al. BioCreative III interactive process: an overview. BMC Bioinformatics S.Arighi,C.NCarterette,BCohen,K.B. et al. An overview in the BioCreative Workshop Track III: interactive text mining process. Database (Oxford) bas.Matis-Mitchell,SRoberts,PTudor, C.Oand Arighi,C.N. BioCreative IV interactive task. Proceedings from the Fourth BioCreative Challenge Evaluation Workshop,Bethesda, MD, pp Wang,Q.HAbdul,S.SAlmeida,L. et al. Overview in the interactive process in BioCreative V. Database (Oxford) baw.Liechti,RGeorge,NEl-Gebali,S. et al. SourceData – a semantic platform for curating and searching figures. bioRxiv,. Singhal,AKasturi,RSivakumar,V. et al. Leveraging net intelligence for obtaining interesting analysis datasets. Proceedings on the International Joint Conferences on Web Intelligence (WI) and Intelligent Agent Technologies (IAT). IEEEWICACM. IEEE,, ppecosystem. Curators are essential for defining text-mining requirements, giving annotation suggestions and stand.